euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

172 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip130 chr1 24775170 24775170 + unknown germline . no 235 NIPAL3
srip1805 chr1 75192898 75192898 - unknown germline . no 235 CRYZ
srip2042 chr1 83042652 83042652 . unknown germline . no 235 .
srip2476 chr1 95801850 95801850 - unknown germline . no 235 .
srip2811 chr1 101978986 101978986 - unknown germline . no 235 .
srip3635 chr1 114742473 114742473 - unknown germline . no 235 .
srip3896 chr1 119553359 119553359 + unknown germline . no 235 .
srip4008 chr1 142645972 142645972 . unknown germline . no 235 .
srip4125 chr1 149308428 149308428 + unknown germline . no 235 LOC645262
srip5045 chr1 169524864 169524864 + unknown germline . no 235 F5
srip5779 chr1 189961322 189961322 - unknown germline . no 235 LOC647132
srip5786 chr1 190972999 190972999 - unknown germline . no 235 .
srip6235 chr1 194934643 194934643 - unknown germline . no 235 .
srip6862 chr1 221827812 221827812 - unknown germline . no 235 .
srip6999 chr1 225272510 225272510 + unknown germline . no 235 DNAH14
srip7077 chr1 231007802 231007802 . unknown germline . no 235 .
srip7219 chr1 237449858 237449858 . unknown germline . no 235 RYR2
srip7379 chr1 242311569 242311569 + unknown germline . no 235 PLD5
srip8455 chr10 25707693 25707693 - unknown germline . no 235 GPR158
srip8794 chr10 38774487 38774487 . unknown germline . no 235 .
srip9809 chr10 82972200 82972200 . unknown germline . no 235 .
srip13819 chr11 33670130 33670130 + unknown germline . no 235 C11orf41
srip14736 chr11 48360744 48360744 - unknown germline . no 235 .
srip15387 chr11 58171843 58171843 + unknown germline . no 235 .
srip16527 chr11 83652358 83652358 - unknown germline . no 235 DLG2
srip17183 chr11 94684368 94684368 + unknown germline . no 235 .
srip19265 chr11 134305645 134305645 - unknown germline . no 235 .
srip19899 chr12 11219195 11219195 - unknown germline . no 235 PRH1-PRR4
srip20133 chr12 12933687 12933687 - unknown germline . no 235 APOLD1
srip21173 chr12 34017331 34017331 - unknown germline . no 235 .
srip21734 chr12 38028955 38028955 . unknown germline . no 235 .
srip22208 chr12 43256979 43256979 - unknown germline . no 235 .
srip22825 chr12 48929056 48929056 + unknown germline . no 235 .
srip23036 chr12 63716098 63716098 + unknown germline . no 235 .
srip24636 chr12 84965140 84965140 + unknown germline . no 235 .
srip26078 chr12 118186932 118186932 + unknown germline . no 235 KSR2
srip26368 chr12 126802932 126802932 - unknown germline . no 235 .
srip27366 chr13 27488117 27488117 + unknown germline . no 235 .
srip28583 chr13 61221163 61221163 - unknown germline . no 235 .
srip29079 chr13 61462340 61462340 - unknown germline . no 235 .
srip30403 chr13 74313866 74313866 + unknown germline . no 235 KLF12
srip30996 chr13 79259790 79259790 - unknown germline . no 235 .
srip33545 chr13 104296230 104296230 - unknown germline . no 235 .
srip35224 chr14 28301256 28301256 + unknown germline . no 235 .
srip35875 chr14 36674752 36674752 + unknown germline . no 235 .
srip37336 chr14 59220393 59220393 + unknown germline . no 235 .
srip38143 chr14 71197789 71197789 + unknown germline . no 235 MAP3K9
srip38624 chr14 86381803 86381803 - unknown germline . no 235 .
srip39122 chr15 26673803 26673803 + unknown germline . no 235 .
srip39760 chr15 37707902 37707902 - unknown germline . no 235 .
srip40237 chr15 47507335 47507335 - unknown germline . no 235 SEMA6D
srip42446 chr15 83551619 83551619 - unknown germline . no 235 HOMER2
srip43253 chr15 100931152 100931152 - unknown germline . no 235 .
srip43574 chr16 6793828 6793828 + unknown germline . no 235 RBFOX1
srip46333 chr16 71028016 71028016 + unknown germline . no 235 HYDIN
srip46817 chr17 13684788 13684788 + unknown germline . no 235 LOC100506974
srip47197 chr17 28398310 28398310 + unknown germline . no 235 EFCAB5
srip47897 chr17 34272157 34272157 + unknown germline . no 235 .
srip48369 chr17 68357405 68357405 + unknown germline . no 235 .
srip48974 chr18 15095255 15095255 - unknown germline . no 235 .
srip50199 chr18 50097750 50097750 - unknown germline . no 235 DCC
srip51838 chr18 74960069 74960069 - unknown germline . no 235 .
srip52343 chr19 29223824 29223824 . unknown germline . no 235 .
srip52430 chr19 45444694 45444694 + unknown germline . no 235 .
srip53472 chr2 23191008 23191008 - unknown germline . no 235 .
srip54267 chr2 36570259 36570259 - unknown germline . no 235 .
srip55318 chr2 69168903 69168903 - unknown germline . no 235 .
srip56227 chr2 82098035 82098035 + unknown germline . no 235 .
srip56869 chr2 106163161 106163161 + unknown germline . no 235 .
srip57901 chr2 137426137 137426137 - unknown germline . no 235 .
srip58235 chr2 141852915 141852915 - unknown germline . no 235 LRP1B
srip59199 chr2 147020925 147020925 + unknown germline . no 235 .
srip59566 chr2 156527820 156527820 + unknown germline . no 235 .
srip60161 chr2 178676252 178676252 - unknown germline . no 235 PDE11A
srip60529 chr2 181000547 181000547 + unknown germline . no 235 .
srip60693 chr2 186369637 186369637 . unknown germline . no 235 .
srip61131 chr2 199779906 199779906 + unknown germline . no 235 .
srip62631 chr2 235519802 235519802 + unknown germline . no 235 .
srip63200 chr20 9477930 9477930 - unknown germline . no 235 .
srip64038 chr20 25895497 25895497 - unknown germline . no 235 .
srip64065 chr20 25903874 25903874 - unknown germline . no 235 .
srip64775 chr20 41952105 41952105 - unknown germline . no 235 .
srip65865 chr21 19517305 19517305 - unknown germline . no 235 .
srip66292 chr21 23626198 23626198 - unknown germline . no 235 .
srip66911 chr21 29069177 29069177 + unknown germline . no 235 .
srip67242 chr22 19210904 19210904 + unknown germline . no 235 CLTCL1
srip71082 chr3 26524455 26524455 - unknown germline . no 235 .
srip71323 chr3 30419389 30419389 - unknown germline . no 235 .
srip72700 chr3 55788572 55788572 + unknown germline . no 235 ERC2
srip73373 chr3 59852896 59852896 + unknown germline . no 235 FHIT
srip75085 chr3 84433390 84433390 + unknown germline . no 235 .
srip75294 chr3 84593281 84593281 . unknown germline . no 235 .
srip75586 chr3 85576556 85576556 + unknown germline . no 235 CADM2
srip77259 chr3 123590719 123590719 + unknown germline . no 235 MYLK
srip78664 chr3 151148550 151148550 - unknown germline . no 235 MED12L
srip79252 chr3 159303172 159303172 + unknown germline . no 235 IQCJ-SCHIP1;SCHIP1
srip79873 chr3 169269958 169269958 + unknown germline . no 235 MECOM
srip80018 chr3 173917219 173917219 - unknown germline . no 235 NLGN1
srip80355 chr3 176091325 176091325 + unknown germline . no 235 .
srip82127 chr3 193354172 193354172 - unknown germline . no 235 OPA1
srip82288 chr4 5667994 5667994 - unknown germline . no 235 EVC2
srip82410 chr4 10632686 10632686 - unknown germline . no 235 CLNK
srip84682 chr4 47007783 47007783 - unknown germline . no 235 .
srip87334 chr4 80768529 80768529 + unknown germline . no 235 GDEP
srip88895 chr4 103343749 103343749 + unknown germline . no 235 .
srip89020 chr4 104214679 104214679 + unknown germline . no 235 .
srip90349 chr4 115132699 115132699 + unknown germline . no 235 .
srip90707 chr4 118765257 118765257 + unknown germline . no 235 .
srip90739 chr4 119118507 119118507 . unknown germline . no 235 NDST3
srip92191 chr4 134596423 134596423 + unknown germline . no 235 .
srip93881 chr4 158907280 158907280 - unknown germline . no 235 .
srip96075 chr5 8749521 8749521 + unknown germline . no 235 .
srip96832 chr5 20555564 20555564 - unknown germline . no 235 .
srip97742 chr5 33633341 33633341 - unknown germline . no 235 ADAMTS12
srip99505 chr5 68263468 68263468 - unknown germline . no 235 .
srip100717 chr5 89450774 89450774 + unknown germline . no 235 .
srip101084 chr5 96866415 96866415 + unknown germline . no 235 .
srip103754 chr5 137014775 137014775 - unknown germline . no 235 KLHL3
srip104325 chr5 147263419 147263419 - unknown germline . no 235 .
srip104853 chr5 154873935 154873935 - unknown germline . no 235 .
srip106671 chr6 6742705 6742705 . unknown germline . no 235 .
srip107505 chr6 13503042 13503042 + unknown germline . no 235 .
srip108004 chr6 32509105 32509105 - unknown germline . no 235 .
srip108704 chr6 46310298 46310298 + unknown germline . no 235 .
srip109166 chr6 58481772 58481772 - unknown germline . no 235 .
srip109535 chr6 63368201 63368201 + unknown germline . no 235 .
srip111043 chr6 77980645 77980645 - unknown germline . no 235 .
srip112047 chr6 91669514 91669514 - unknown germline . no 235 .
srip112697 chr6 102283763 102283763 - unknown germline . no 235 GRIK2
srip113813 chr6 142450105 142450105 - unknown germline . no 235 .
srip114434 chr6 148163579 148163579 + unknown germline . no 235 .
srip115693 chr6 162181262 162181262 + unknown germline . no 235 PARK2
srip116167 chr7 8886707 8886707 + unknown germline . no 235 .
srip117629 chr7 53652509 53652509 - unknown germline . no 235 .
srip117991 chr7 61975096 61975096 - unknown germline . no 235 .
srip118879 chr7 70188681 70188681 - unknown germline . no 235 AUTS2
srip119829 chr7 84901724 84901724 - unknown germline . no 235 .
srip120994 chr7 97374630 97374630 + unknown germline . no 235 .
srip121753 chr7 107829256 107829256 + unknown germline . no 235 NRCAM
srip122004 chr7 108325669 108325669 + unknown germline . no 235 .
srip122275 chr7 110484750 110484750 + unknown germline . no 235 IMMP2L
srip122555 chr7 118343813 118343813 . unknown germline . no 235 .
srip124070 chr8 4452901 4452901 - unknown germline . no 235 CSMD1
srip124373 chr8 5829282 5829282 - unknown germline . no 235 .
srip125433 chr8 24926547 24926547 - unknown germline . no 235 .
srip125861 chr8 46907900 46907900 - unknown germline . no 235 .
srip126445 chr8 62115153 62115153 + unknown germline . no 235 NPM1P6
srip126776 chr8 67381881 67381881 - unknown germline . no 235 .
srip127450 chr8 72399228 72399228 - unknown germline . no 235 .
srip127580 chr8 75723729 75723729 + unknown germline . no 235 .
srip128262 chr8 87315042 87315042 + unknown germline . no 235 .
srip128425 chr8 91446037 91446037 + unknown germline . no 235 .
srip129662 chr8 119721696 119721696 - unknown germline . no 235 SAMD12-AS1
srip130473 chr8 141938078 141938078 . unknown germline . no 235 PTK2
srip131089 chr9 6290487 6290487 + unknown germline . no 235 .
srip131364 chr9 7741401 7741401 + unknown germline . no 235 .
srip133421 chr9 32463891 32463891 - unknown germline . no 235 DDX58
srip133630 chr9 34904794 34904794 - unknown germline . no 235 .
srip134043 chr9 74904917 74904917 - unknown germline . no 235 .
srip135877 chr9 118083873 118083873 - unknown germline . no 235 DEC1
srip136501 chrX 14152007 14152007 - unknown germline . no 235 .
srip138350 chrX 66982762 66982762 - unknown germline . no 235 .
srip138603 chrX 74928698 74928698 - unknown germline . no 235 .
srip139779 chrX 98264296 98264296 - unknown germline . no 235 .
srip140088 chrX 102363181 102363181 . unknown germline . no 235 .
srip140307 chrX 111229565 111229565 - unknown germline . no 235 TRPC5
srip140465 chrX 111557754 111557754 - unknown germline . no 235 ZCCHC16
srip140803 chrX 119892837 119892837 - unknown germline . no 235 .
srip141058 chrX 122664864 122664864 - unknown germline . no 235 .
srip141371 chrX 129525275 129525275 - unknown germline . no 235 .
srip142271 chrY 13490335 13490335 + unknown germline . no 235 .
srip142321 chrY 13863207 13863207 . unknown germline . no 235 .